doc. Ing. Václav Klika, Ph.D.

e-mail: show e-mail
telephone: +420 22435 8545
room: 107a
www: http://kmlinux.fjfi.cvut.cz/~klikavac/
 
timetable

Towards self-organisation in real systems: models and analysis

advisor: doc. Ing. Václav Klika, Ph.D.
e-mail: show e-mail
type: phd thesis
branch of study: MI_MM
attached file: ikona pdf
description: The aim of this topic is to extend the current models of spatial self-organisation and discuss the significance of these extensions in real systems via a combination of analytical and numerical tools. See the attachment for more details.
last update: 09.09.2020 09:35:27

Semigroups and non-equilibrium thermodynamics

advisor: doc. Ing. Václav Klika, Ph.D.
e-mail: show e-mail
type: phd thesis
branch of study: MI_MM
attached file: ikona pdf
description: The aim of non-equilibrium thermodynamics is to present a rather general framework for formulation of thermodynamically consistent models. In an ideal world, we would like to guarantee the knowledge of mathematical well-posedness of the proposed models, which is almost perpendicular to the former approach (function spaces, boundary and initial conditions etc). See the attachment for more details.
last update: 09.09.2020 09:37:36

V3S Database

The application records results of science and research, and other academic activities. The V3S application serves as a tool for submitting data to the RIV database, exporting data for statistic analyses, and internal evaluation of research.

List of publications in V3S

Books

2011

Klika, V. and Maršík, F., Feasible Simulation of Diseases Related to Bone Remodelling and of Their Treatment, Theoretical Biomechanics, InTech, 2011,
BiBTeX
@INBOOK{Klika11:1854,
  title = {{Feasible Simulation of Diseases Related to Bone Remodelling and of Their Treatment}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F.},
  address = {Rijeka},
  booktitle = {{Theoretical Biomechanics}},
  publisher = {InTech},
  year = {2011},
  pages = {187--210}
}

2010

Klika, V. and Maršík, F. and Mařík, I., Influencing the Effect of Treatment of Diseases Related to Bone Remodelling by Dynamic Loading, Dynamic Modelling, In-Teh, 2010,
BiBTeX
@INBOOK{Klika10:1704,
  title = {{Influencing the Effect of Treatment of Diseases Related to Bone Remodelling by Dynamic Loading}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F. and Ma{\v r}{\'\i}k, I.},
  address = {Viena},
  booktitle = {{Dynamic Modelling}},
  publisher = {In-Teh},
  year = {2010},
  pages = {263--290}
}

Articles

2014

Klika, V., A Guide through Available Mixture Theories for Applications, Critical Reviews in Solid State and Materials Sciences 39 (2014) , 154-174
BiBTeX
@ARTICLE{Klika14:2116,
  title = {{A Guide through Available Mixture Theories for Applications}},
  author = {Klika, V.},
  journal = {Critical Reviews in Solid State and Materials Sciences},
  year = {2014},
  volume = {39},
  number = {2},
  pages = {154--174},
  month = {FEB}
}

2013

Klika, V. and Grmela, M., Coupling between chemical kinetics and mechanics that is both nonlinear and compatible with thermodynamics, Physical Review E 87 (2013) , 012141-1-012141-9
BiBTeX
@ARTICLE{Klika13:2014,
  title = {{Coupling between chemical kinetics and mechanics that is both nonlinear and compatible with thermodynamics}},
  author = {Klika, V. and Grmela, M.},
  journal = {Physical Review E},
  year = {2013},
  volume = {87},
  number = {1},
  pages = {012141-1--012141-9}
}

2012

Klika, V. and Baker, RE and Headon, D. and Gaffney, EA, The Influence of Receptor-Mediated Interactions on Reaction-Diffusion Mechanisms of Cellular Self-organisation, BULLETIN OF MATHEMATICAL BIOLOGY 74 (2012) , 935-957
BiBTeX
@ARTICLE{Klika12:1850,
  title = {{The Influence of Receptor-Mediated Interactions on Reaction-Diffusion Mechanisms of Cellular Self-organisation}},
  author = {Klika, V. and Baker, RE and Headon, D. and Gaffney, EA},
  journal = {BULLETIN OF MATHEMATICAL BIOLOGY},
  year = {2012},
  volume = {74},
  number = {4},
  pages = {935--957}
}

2011

Myslivec, R. and Klika, V. and Zemková, D. and Maříková, A. and Mařík, I., Prediction of suitable time instant for external fixation removal in distraction osteogenesis according to a simple biomechanical model, Pohybové ústrojí. Pokroky ve výzkumu, diagnostice a terapii 18 (2011) , 328-333
BiBTeX
@ARTICLE{Myslivec11:1,
  title = {{Prediction of suitable time instant for external fixation removal in distraction osteogenesis according to a simple biomechanical model}},
  author = {Myslivec, R. and Klika, V. and Zemkov{\' a}, D. and Ma{\v r}{\'\i}kov{\' a}, A. and Ma{\v r}{\'\i}k, I.},
  journal = {Pohybov{\' e} {\' u}stroj{\'\i}. Pokroky ve v{\' y}zkumu, diagnostice a terapii},
  year = {2011},
  volume = {18},
  number = {3+4},
  pages = {328--333}
}
Klika, V. and Maršík, F., Feasible prediction of bone remodelling using modelling techniques, Pohybové ústrojí. Pokroky ve výzkumu, diagnostice a terapii 18 (2011) , 26-41
BiBTeX
@ARTICLE{Klika11:1877,
  title = {{Feasible prediction of bone remodelling using modelling techniques}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F.},
  journal = {Pohybov{\' e} {\' u}stroj{\'\i}. Pokroky ve v{\' y}zkumu, diagnostice a terapii},
  year = {2011},
  volume = {18},
  number = {1+2},
  pages = {26--41}
}
Klika, V., Počítačové modelování tká\v nové přestavby, Československý časopis pro fyziku 61 (2011) , 272-277
BiBTeX
@ARTICLE{Klika11:1854,
  title = {{Po{\v c}{\'\i}ta{\v c}ov{\' e} modelov{\' a}n{\'\i} tk{\' a}{\v n}ov{\' e} p{\v r}estavby}},
  author = {Klika, V.},
  journal = {{\v C}eskoslovensk{\' y} {\v c}asopis pro fyziku},
  year = {2011},
  volume = {61},
  number = {5},
  pages = {272--277},
  month = {11}
}

2010

Klika, V. and Maršík, F., A thermodynamic model of bone remodelling: the influence of dynamic loading together with biochemical control, Journal of Musculoskeletal & Neuronal Interactions 10 (2010) , 220-230
BiBTeX
@ARTICLE{Klika10:1704,
  title = {{A thermodynamic model of bone remodelling: the influence of dynamic loading together with biochemical control}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F.},
  journal = {Journal of Musculoskeletal \& Neuronal Interactions},
  year = {2010},
  volume = {10},
  number = {3},
  pages = {220--230},
  month = {Sep}
}
Klika, V., Comparison of the Effects of Possible Mechanical Stimuli on the Rate of Biochemical Reactions, The Journal of Physical Chemistry B 114 (2010) , 10567-10572
BiBTeX
@ARTICLE{Klika10:1704,
  title = {{Comparison of the Effects of Possible Mechanical Stimuli on the Rate of Biochemical Reactions}},
  author = {Klika, V.},
  journal = {The Journal of Physical Chemistry B},
  year = {2010},
  volume = {114},
  number = {32},
  pages = {10567--10572},
  month = {Aug}
}
Bougherara, H. and Klika, V. and Maršík, F. and Mařík, IA and Yahia, L., New Predictive Model for Monitoring Bone Remodeling, Journal of Biomedical Materials Research Part A 95A (2010) , 9-24
BiBTeX
@ARTICLE{Bougherara10,
  title = {{New Predictive Model for Monitoring Bone Remodeling}},
  author = {Bougherara, H. and Klika, V. and Mar{\v s}{\'\i}k, F. and Ma{\v r}{\'\i}k, IA and Yahia, L.},
  journal = {Journal of Biomedical Materials Research Part A},
  year = {2010},
  volume = {95A},
  number = {1},
  pages = {9--24},
  month = {Oct}
}
Maršík, F. and Klika, V. and Chlup, H., Remodelling of living bone induced by dynamic loading and drug delivery-Numerical modelling and clinical treatment, Mathematics and Computers in Simulation 80 (2010) , 1278-1288
BiBTeX
@ARTICLE{Marsik10:158,
  title = {{Remodelling of living bone induced by dynamic loading and drug delivery-Numerical modelling and clinical treatment}},
  author = {Mar{\v s}{\'\i}k, F. and Klika, V. and Chlup, H.},
  journal = {Mathematics and Computers in Simulation},
  year = {2010},
  volume = {80},
  number = {6},
  pages = {1278--1288},
  month = {6}
}

2009

Klika, V. and Maršík, F., Coupling Effect between Mechanical Loading and Chemical Reactions, JOURNAL OF PHYSICAL CHEMISTRY B 113 (2009) , 14689-14697
BiBTeX
@ARTICLE{Klika09:1588,
  title = {{Coupling Effect between Mechanical Loading and Chemical Reactions}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F.},
  journal = {JOURNAL OF PHYSICAL CHEMISTRY B},
  year = {2009},
  volume = {113},
  number = {44},
  pages = {14689--14697}
}

Klika, V. and Pérez, MA and García-Aznar, JM and Maršík, F. and Doblaré, M., A coupled mechano-biochemical model for bone adaptation, Journal of Mathematical Biology () , -
BiBTeX
@ARTICLE{Klika:211667,
  title = {{A coupled mechano-biochemical model for bone adaptation}},
  author = {Klika, V. and P{\' e}rez, MA and Garc{\'\i}a-Aznar, JM and Mar{\v s}{\'\i}k, F. and Doblar{\' e}, M.},
  journal = {Journal of Mathematical Biology},
  pages = {--}
}

Contributions in proceedings

2009

Klika, V. and Maršík, F., Simulation/prediction of osteogenic effects of vibration plates using thermodynamics model-a preliminary study, Sympozjum Naukowe "Latest archievements in orthopedics and in pediatrics orthopedics. Prophylatics programs in 'Bone and Joint Decade 2000-2010", (2009) , 148-151, Wydavnictwo AGATKA
BiBTeX
@INPROCEEDINGS{Klika09:1705,
  title = {{Simulation/prediction of osteogenic effects of vibration plates using thermodynamics model-a preliminary study}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F.},
  address = {Kloczew},
  booktitle = {{Sympozjum Naukowe "Latest archievements in orthopedics and in pediatrics orthopedics. Prophylatics programs in 'Bone and Joint Decade 2000-2010"}},
  publisher = {Wydavnictwo AGATKA},
  year = {2009},
  pages = {148--151}
}

2008

Klika, V., Towards real prediction of bone adaptation, Doktorandské dny 2008, (2008) , 83-92, Česká technika - nakladatelství ČVUT
BiBTeX
@INPROCEEDINGS{Klika08:1509,
  title = {{Towards real prediction of bone adaptation}},
  author = {Klika, V.},
  address = {Praha},
  booktitle = {{Doktorandsk{\' e} dny 2008}},
  publisher = {{\v C}esk{\' a} technika - nakladatelstv{\'\i} {\v C}VUT},
  year = {2008},
  pages = {83--92}
}

2007

Klika, V., Thermodynamic Model of Bone Adaptation, Doktorandské dny 2007, (2007) , 93-104, Česká technika - nakladatelství ČVUT
BiBTeX
@INPROCEEDINGS{Klika07:1376,
  title = {{Thermodynamic Model of Bone Adaptation}},
  author = {Klika, V.},
  address = {Praha},
  booktitle = {{Doktorandsk{\' e} dny 2007}},
  publisher = {{\v C}esk{\' a} technika - nakladatelstv{\'\i} {\v C}VUT},
  year = {2007},
  pages = {93--104}
}

Klika, V. and Maršík, F., Tissue adaptation driven by chemo-mechanical coupling with application to bone, , () , 337-338,
BiBTeX
@INPROCEEDINGS{Klika:184903,
  title = {{Tissue adaptation driven by chemo-mechanical coupling with application to bone}},
  author = {Klika, V. and Mar{\v s}{\'\i}k, F.},
  booktitle = {{}},
  pages = {337--338}
}

Others

2009

Klika, V., Towards longterm prediction of tissue remodelling, České vysoké učení technické v Praze, Fakulta jaderná a fyzikálně inženýrská, 2009
BiBTeX
@PHDTHESIS{Klika09:1588,
  title = {{Towards longterm prediction of tissue remodelling}},
  author = {Klika, V.},
  address = {Praha},
  year = {2009},
  pages = {103},
  school = {{\v C}esk{\' e} vysok{\' e} u{\v c}en{\'\i} technick{\' e} v Praze, Fakulta jadern{\' a} a fyzik{\' a}ln{\v e} in{\v z}en{\' y}rsk{\' a}}
}

2001

Klika, V., Biochemical model of bone remodelling including mechano-chemical coupling, 2001
BiBTeX
@UNPUBLISHED{Klika01:1704,
  title = {{Biochemical model of bone remodelling including mechano-chemical coupling}},
  author = {Klika, V.},
  year = {2001},
  note = {Unpublished Lecture}
}

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